STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98977.1Carbamoyl-phosphate synthase, large subunit. (1074 aa)    
Predicted Functional Partners:
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
 0.999
pyrB
KEGG: bvu:BVU_3337 2.3e-138 pyrB; aspartate carbamoyltransferase catalytic subunit K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.998
EHG98975.1
Class II glutamine amidotransferase.
  
 
 0.977
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
  
 
 0.961
EHH00352.1
Dihydroorotase; KEGG: pru:PRU_1614 9.0e-144 pyrC; dihydroorotase K01465; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.960
EHH02082.1
KEGG: bfs:BF0481 2.2e-181 argG; putative argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.957
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
   
  0.946
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
  
 
  0.920
EHG99058.1
Putative dihydroorotate oxidase, electron transfer subunit.
 
 0.913
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.893
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.