STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99029.1LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
  
  
 0.600
EHG99030.1
Hypothetical protein.
       0.548
EHH00322.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_3052 3.6e-85 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
 
 0.520
EHG99031.1
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.504
EHH00015.1
KEGG: sub:SUB0808 1.8e-186 pyridine nucleotide-disulphide oxidoreductase family protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the sulfur carrier protein TusA family.
  
  
 0.501
EHG98398.1
KEGG: gfo:GFO_0006 2.5e-21 sugar-binding sensor histidine kinase/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.500
EHG99027.1
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: bvu:BVU_2994 1.8e-17 ATP synthase epsilon chain; K02114 F-type H+-transporting ATPase subunit epsilon.
     
 0.479
EHG98484.1
Transcriptional regulator, AraC family; KEGG: bcu:BCAH820_3751 2.1e-13 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K13530; Psort location: Cytoplasmic, score: 9.26.
  
    0.479
EHG99339.1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: npu:Npun_F5788 3.2e-36 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  
   0.438
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.415
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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