STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99044.1Hypothetical protein; Belongs to the agmatine deiminase family. (376 aa)    
Predicted Functional Partners:
EHG99043.1
Hydrolase, carbon-nitrogen family.
 
 0.997
speA
Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine.
 
  
 0.751
EHG99042.1
Glutamate--ammonia ligase, catalytic domain protein; Belongs to the glutamine synthetase family.
       0.657
EHG99046.1
Conserved hypothetical protein TIGR00245.
       0.581
EHG99045.1
ABC transporter, ATP-binding protein.
       0.568
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.523
EHG99047.1
Dinuclear metal center protein, YbgI family.
     
 0.521
EHH01203.1
Hydrolase, carbon-nitrogen family; KEGG: gfo:GFO_2116 9.6e-179 carbon-nitrogen hydrolase K01506; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.473
EHG98948.1
Hydrolase, carbon-nitrogen family.
  
 
 0.473
EHG99040.1
Hypothetical protein.
       0.470
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.