STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99076.1Putative cell division ATP-binding protein FtsE. (245 aa)    
Predicted Functional Partners:
EHH00858.1
Efflux ABC transporter, permease protein; KEGG: pva:Pvag_3009 1.4e-08 ftsX; cell division membrane protein FtsX; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.954
EHH00671.1
Efflux ABC transporter, permease protein.
 
      0.900
EHG99735.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.850
hisI
phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family.
       0.788
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.780
EHG99075.1
Amino acid kinase family protein; Belongs to the aspartokinase family.
       0.773
EHG99073.1
Glycosyltransferase, group 2 family protein; KEGG: gfo:GFO_2701 4.4e-32 transmembrane family-2 glycosyl transferase K00754; Psort location: CytoplasmicMembrane, score: 9.46.
       0.767
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.717
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase.
       0.717
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.717
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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