STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98797.1SusD family protein. (677 aa)    
Predicted Functional Partners:
EHG98796.1
TonB-dependent receptor plug domain protein.
 
     0.951
EHG98794.1
Carbohydrate binding module.
 
 
  0.808
EHH01638.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
 
   0.792
EHH00852.1
FG-GAP repeat protein; KEGG: npu:Npun_F4869 3.7e-07 putative outer membrane adhesin like proteiin.
  
 0.784
EHH01634.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
   0.774
EHH01757.1
Hypothetical protein.
  
 
   0.767
EHH01756.1
TonB-dependent receptor plug domain protein; KEGG: ddd:Dda3937_04300 2.7e-06 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.52.
  
 
   0.763
EHG98795.1
NHL repeat protein.
 
     0.728
EHH00445.1
Hypothetical protein.
  
     0.720
EHH01071.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.