STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98798.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
EHG98797.1
SusD family protein.
  
 
  0.705
EHG98796.1
TonB-dependent receptor plug domain protein.
  
    0.703
EHG98795.1
NHL repeat protein.
  
 
  0.621
EHG98799.1
Hypothetical protein.
       0.608
EHH01665.1
Glycosyl hydrolase, family 88; KEGG: bsu:BSU30120 2.3e-21 yteR; unsaturated rhamnogalacturonyl hydrolase.
    
  0.602
EHG98794.1
Carbohydrate binding module.
       0.490
EHH00872.1
KEGG: pmz:HMPREF0659_A6052 5.8e-101 menC; O-succinylbenzoate synthase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.473
EHH00606.1
Hydrolase, alpha/beta domain protein; KEGG: pen:PSEEN2033 5.5e-25 alpha/beta fold family hydrolase; K01055 3-oxoadipate enol-lactonase; Psort location: Cytoplasmic, score: 8.96.
    
 0.401
EHG99518.1
Hydrolase, alpha/beta domain protein; KEGG: bmd:BMD_3319 1.7e-13 putative hydrolase K06889.
    
 0.401
EHG98603.1
Hypothetical protein; KEGG: nve:NEMVE_v1g125604 0.0026 hypothetical protein; K13699 abhydrolase domain-containing protein 5.
    
 0.401
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.