STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98812.1Class II Aldolase and Adducin domain protein; KEGG: pho:PH0191 1.0e-25 L-fuculose phosphate aldolase K01628; Psort location: Cytoplasmic, score: 8.96. (221 aa)    
Predicted Functional Partners:
EHG98813.1
Carbohydrate kinase, FGGY family protein; KEGG: bth:BT_1275 1.8e-152 L-fuculose kinase; K00879 L-fuculokinase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.948
EHG98814.1
KEGG: bvu:BVU_0190 1.9e-47 hypothetical protein; K03534 L-rhamnose mutarotase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.820
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
 
 0.816
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.686
EHG98815.1
L-fucose:H+ symporter permease; KEGG: gdj:Gdia_1396 8.7e-21 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.675
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.603
EHG99935.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: bfr:BF3299 3.5e-165 fructose-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.575
EHH01344.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; KEGG: bfs:BF3274 3.6e-108 punA, deoD, pnp; purine nucleoside phosphorylase K03783; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.574
EHG99875.1
KEGG: bvu:BVU_0050 3.9e-79 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
     
 0.532
uxaC
KEGG: bth:BT_0823 6.7e-203 glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
     
 0.526
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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