STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98836.1GDSL-like protein; KEGG: aca:ACP_0560 3.2e-45 rha1; rhamnogalacturonan acetylesterase; Psort location: Cytoplasmic, score: 8.96. (547 aa)    
Predicted Functional Partners:
EHH01665.1
Glycosyl hydrolase, family 88; KEGG: bsu:BSU30120 2.3e-21 yteR; unsaturated rhamnogalacturonyl hydrolase.
 
  0.967
EHG98886.1
FG-GAP repeat protein.
  0.920
EHH01664.1
Hypothetical protein; KEGG: bsu:BSU07090 6.0e-154 yetA; putative enzyme.
 
  0.851
EHH00633.1
FG-GAP repeat protein; KEGG: bsu:BSU07050 5.2e-116 yesW; polysaccharide lyase; lipoprotein.
  0.844
EHH01666.1
Hypothetical protein; KEGG: cja:CJA_0170 2.8e-18 urh105A; unsaturated rhamnogalacturonyl hydrolase, putative, urh105A; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.763
EHG99302.1
Hypothetical protein.
  
     0.753
EHG99426.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.752
EHH00252.1
FG-GAP repeat protein; KEGG: bsu:BSU07050 1.8e-87 yesW; polysaccharide lyase; lipoprotein.
  
     0.733
EHH01913.1
Glycosyl hydrolase, family 43; KEGG: sli:Slin_4788 3.6e-163 xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
 
  0.706
EHG98955.1
Glycosyl hydrolase, family 88.
 
  0.689
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.