STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98861.1Putative membrane protein. (380 aa)    
Predicted Functional Partners:
EHG98859.1
Putative DNA helicase.
       0.773
EHG98860.1
ABC transporter, ATP-binding protein.
       0.572
EHG98862.1
Hypothetical protein.
       0.552
EHG98093.1
Hypothetical protein; KEGG: coc:Coch_0228 3.6e-19 DAHP synthetase I/KdsA; K04516 chorismate mutase.
 
     0.479
EHH00138.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.473
EHH01441.1
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.6e-17 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.471
EHG99706.1
MATE efflux family protein; KEGG: apb:SAR116_1482 8.1e-14 DNA-damage-inducible protein F K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.412
EHH01159.1
Arylsulfatase; KEGG: vex:VEA_003619 1.3e-46 phosphoglycerol transferase I; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.410
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.