STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98865.1GSCFA family protein. (329 aa)    
Predicted Functional Partners:
EHG98140.1
Hypothetical protein.
  
     0.763
EHG98866.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.685
EHH00842.1
KEGG: bvu:BVU_1187 3.1e-102 uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.600
EHG98863.1
TrkA protein.
       0.568
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.568
EHH01113.1
Hypothetical protein.
  
     0.543
EHH01646.1
KEGG: bvu:BVU_0208 0. DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A; Psort location: Cytoplasmic, score: 9.97.
  
     0.500
EHH02053.1
Hypothetical protein; Psort location: Extracellular, score: 9.65.
   
  0.494
EHH01510.1
HNH endonuclease domain protein; KEGG: bse:Bsel_0552 5.0e-06 metalloendopeptidase, glycoprotease family; Psort location: Cytoplasmic, score: 8.96.
   
  0.494
EHH01511.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
  0.494
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.