STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98867.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
   
 0.903
EHG98866.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.843
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
 0.760
EHG98868.1
Hypothetical protein.
       0.598
EHH01782.1
Peptidase dimerization domain protein; KEGG: bvu:BVU_1483 5.1e-125 putative peptidase/deacetylase; K01438 acetylornithine deacetylase; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.470
EHG99447.1
Peptidase dimerization domain protein; KEGG: gfo:GFO_0056 1.4e-136 M20/M25/M40 family peptidase; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.470
EHH00557.1
Asparagine synthase; KEGG: bvu:BVU_4009 8.8e-256 asnB; asparagine synthetase B; K01953 asparagine synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 9.97.
   
 0.464
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.454
EHH00491.1
Hypothetical protein.
  
 
 0.453
purD
KEGG: bvu:BVU_1095 6.9e-185 phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
    
 0.441
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.