STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98670.1Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. (944 aa)    
Predicted Functional Partners:
EHG98666.1
KEGG: bvu:BVU_3687 5.6e-254 type I restriction enzyme EcoR124II M protein; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
 
 0.997
EHH01655.1
KEGG: rbo:A1I_07890 1.8e-113 type I restriction-modification system methyltransferase subunit; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.991
EHG98664.1
KEGG: lmc:Lm4b_00545 3.7e-44 specificity determinant HsdS; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.970
EHG98660.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A7328 2.4e-72 hypothetical protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.888
EHG98661.1
KEGG: gfo:GFO_0679 9.6e-37 type I restriction-modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit.
 
  
 0.872
EHG98665.1
Toxin-antitoxin system, toxin component, Fic family; Psort location: Cytoplasmic, score: 8.96.
  
    0.839
EHG98663.1
Hypothetical protein; KEGG: msi:Msm_0158 7.5e-21 type I restriction-modification system methylase, subunit S; K01154 type I restriction enzyme, S subunit.
 
  
 0.798
EHG98668.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.778
EHH02058.1
Helicase protein; KEGG: oih:OB2192 2.0e-06 hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific); Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
EHH01422.1
Helicase protein; KEGG: pic:PICST_56808 0.00022 RAD26; DNA dependent ATPase K10841; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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