STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98700.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (134 aa)    
Predicted Functional Partners:
EHG98701.1
Hypothetical protein; Overlaps another CDS with the same product name.
     0.994
EHG98702.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.773
EHG98703.1
Hypothetical protein; KEGG: bvu:BVU_1501 3.1e-38 phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.702
EHG99111.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
      0.417
EHG98704.1
KEGG: bfs:BF1269 2.6e-89 putative sugar O-acetyltransferase K00661; Psort location: Cytoplasmic, score: 9.97.
       0.413
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.