STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98711.1Hypothetical protein; KEGG: rcp:RCAP_rcc02895 2.1e-42 mdtF; multidrug resistance protein MdtF; Psort location: CytoplasmicMembrane, score: 10.00. (750 aa)    
Predicted Functional Partners:
EHH00088.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 5.4e-07 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.793
EHG98712.1
Putative response regulator ArlR; KEGG: rru:Rru_A0525 3.7e-28 two component transcriptional regulator / cell cycle transcriptional regulator CtrA K13584; Psort location: Cytoplasmic, score: 9.97.
 
     0.743
EHH00038.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.1e-14 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.742
EHH00517.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.741
EHG98713.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_1224 4.2e-43 two-component system sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
   0.732
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.686
EHH00848.1
Efflux transporter, RND family, MFP subunit; Psort location: Cytoplasmic, score: 8.96; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.683
EHG98709.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.639
EHG98710.1
IstB-like ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
       0.639
EHH00022.1
Efflux transporter, RND family, MFP subunit; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.634
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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