STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98723.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (190 aa)    
Predicted Functional Partners:
EHH00705.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
EHG98724.1
KEGG: pru:PRU_0173 4.6e-188 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
EHG99961.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 0.975
EHH00929.1
WxcM-like protein.
 
 
  0.922
EHH01013.1
Hypothetical protein.
  
 
 0.825
EHG99728.1
Nucleotidyl transferase; KEGG: bth:BT_1633 1.5e-61 mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.818
EHG98381.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.818
EHH01459.1
UDP-galactopyranose mutase; KEGG: bfs:BF1370 3.7e-122 wcfM; putative LPS biosynthesis related UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase.
  
  
 0.795
EHH01137.1
UDP-galactopyranose mutase; KEGG: bvu:BVU_1063 2.9e-170 putative LPS biosynthesis related UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.795
EHG99144.1
Nucleotide sugar dehydrogenase; KEGG: pdi:BDI_3238 4.5e-197 UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.784
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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