STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98725.1GHMP kinase protein; KEGG: lma:LmjF16.0480 2.1e-160 fucose kinase K05305; Psort location: Cytoplasmic, score: 8.96. (947 aa)    
Predicted Functional Partners:
hisB
Histidinol-phosphatase; KEGG: pru:PRU_0455 5.4e-153 hisB; histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.874
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
 0.793
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
     
 0.786
EHG98718.1
Hypothetical protein.
 
     0.745
EHG98450.1
SusD family protein; Psort location: OuterMembrane, score: 9.49.
  
     0.732
EHG98449.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
     0.702
EHG99728.1
Nucleotidyl transferase; KEGG: bth:BT_1633 1.5e-61 mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.682
EHG99936.1
Hypothetical protein.
  
     0.656
EHG98267.1
Hypothetical protein; KEGG: edi:EDI_341030 7.4e-22 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.97.
  
     0.640
EHG98381.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.621
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.