STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98735.1Hypothetical protein; KEGG: ccb:Clocel_1455 0.0034 LPXTG-motif cell wall anchor domain-containing protein. (1217 aa)    
Predicted Functional Partners:
EHG98736.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.705
EHH00380.1
Tetratricopeptide repeat protein; KEGG: dsh:Dshi_1167 0.00081 peptidase M48 Ste24p; Psort location: Cytoplasmic, score: 8.96.
   
  0.519
EHG98737.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.508
EHG98738.1
Addiction module toxin, Txe/YoeB family; KEGG: eco:b4539 2.4e-15 yoeB, ECK2011, JW5331; toxin of the YoeB-YefM toxin-antitoxin system; K01175.
       0.508
EHG98734.1
Hypothetical protein; KEGG: ccb:Clocel_1455 5.0e-06 LPXTG-motif cell wall anchor domain-containing protein.
      
0.429
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.