STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98465.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
EHG98466.1
KEGG: mpd:MCP_1358 0.0052 putative phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase; Psort location: Cytoplasmic, score: 8.96.
       0.791
EHG98467.1
Immunoglobulin-binding regulator B; Psort location: Cytoplasmic, score: 9.97.
       0.791
EHG98463.1
Restriction endonuclease; Psort location: Cytoplasmic, score: 8.96.
       0.625
EHG98462.1
Hypothetical protein.
       0.471
EHG98464.1
Hypothetical protein.
       0.471
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.459
EHG98460.1
Metallo-beta-lactamase domain protein; KEGG: fba:FIC_00295 1.3e-34 hydroxyacylglutathione hydrolase; Psort location: Cytoplasmic, score: 9.97.
       0.448
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.