STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98517.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (458 aa)    
Predicted Functional Partners:
EHG98518.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    0.967
EHG98515.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.919
EHG98510.1
Hypothetical protein; KEGG: azc:AZC_3601 1.2e-27 putative N-acetylmuramoyl-L-alanine amidase; K01447 N-acetylmuramoyl-L-alanine amidase.
 
     0.841
EHG98512.1
KEGG: eck:EC55989_1063 2.8e-25 clp; putative ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp) of prophage; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase S14 family.
 
     0.811
EHG98516.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.795
EHG99662.1
Phage uncharacterized protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.790
EHG99666.1
Phage protein F-like protein; Psort location: Cytoplasmic, score: 8.96.
    0.788
EHG99658.1
Hypothetical protein; KEGG: azc:AZC_3601 5.5e-25 putative N-acetylmuramoyl-L-alanine amidase; K01447 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 8.96.
 
     0.762
EHG99668.1
Hypothetical protein; KEGG: kol:Kole_0140 3.3e-10 RNA-directed DNA polymerase (reverse transcriptase); K00986 RNA-directed DNA polymerase; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
  
     0.698
EHG98514.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.689
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.