STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98531.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
EHG98532.1
Hypothetical protein.
       0.773
EHG98530.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.763
EHG98529.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.667
EHG98524.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.662
EHG98528.1
Hypothetical protein; KEGG: sul:SYO3AOP1_0247 0.00083 DNA repair protein RadA K04485; Psort location: Cytoplasmic, score: 8.96.
       0.661
EHG98525.1
Hypothetical protein.
       0.654
EHG98526.1
Hypothetical protein.
       0.654
EHG98527.1
Hypothetical protein.
       0.652
EHG98523.1
Hypothetical protein.
       0.649
EHG98522.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.620
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.