STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98535.1Peptidase S24-like protein; KEGG: cyb:CYB_2330 0.00012 S24 family peptidase K01362. (254 aa)    
Predicted Functional Partners:
EHH01219.1
Fasciclin domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.537
EHG98533.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.526
EHG98534.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.526
EHH01894.1
KEGG: bvu:BVU_1258 5.7e-174 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
  0.472
EHG99202.1
Glycosyl hydrolase, family 15; KEGG: gfo:GFO_1042 5.8e-165 glycosy hydrolase family protein K01238; Psort location: Cytoplasmic, score: 8.96.
  
     0.467
EHG99203.1
Trehalose-phosphatase; KEGG: bvu:BVU_3259 8.8e-288 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; K00697 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Psort location: Cytoplasmic, score: 9.97.
  
     0.464
EHG98674.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.434
EHH01029.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.430
EHH00587.1
Fasciclin domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.423
EHH00100.1
Fasciclin domain protein.
  
     0.420
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.