STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98561.1Carbohydrate binding domain protein; KEGG: ote:Oter_0330 4.0e-157 alpha-N-arabinofuranosidase. (836 aa)    
Predicted Functional Partners:
EHG99498.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.3e-13 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
  
 0.828
EHG98560.1
KEGG: pdi:BDI_0983 0. beta-galactosidase; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96.
    
  0.786
EHH00627.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.4e-17 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.784
EHG98559.1
Glycosyl hydrolase, family 43; KEGG: xcv:XCV0150 8.3e-125 xylB1; xylosidase precursor K01198.
 
  
  0.753
EHG99603.1
Glycosyl hydrolase family 32; KEGG: bpb:bpr_I1784 6.6e-29 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.752
EHG98243.1
Hypothetical protein; KEGG: bpb:bpr_I1784 3.5e-20 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
 
 
  0.751
EHG99561.1
Glycosyl hydrolase, family 43; KEGG: afm:AFUA_2G04480 1.4e-37 xylosidase/arabinosidase K01238; Belongs to the glycosyl hydrolase 43 family.
  
 0.655
EHG98937.1
Alpha-L-arabinofuranosidase.
 
 
 
0.649
EHH00127.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.601
EHG99521.1
KEGG: fjo:Fjoh_3113 6.6e-148 alpha-N-arabinofuranosidase K01209.
  
  
 
0.593
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.