STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98245.1Hypothetical protein; KEGG: bde:BDP_0131 9.2e-07 endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family. (379 aa)    
Predicted Functional Partners:
EHH01849.1
Hypothetical protein; KEGG: fno:Fnod_0296 4.0e-09 glucan endo-1,6-beta-glucosidase K01201.
 
 
  0.837
EHH01618.1
Fibronectin type III domain protein; KEGG: lin:lin0153 0.00044 hypothetical protein; K01183 chitinase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.787
EHG99603.1
Glycosyl hydrolase family 32; KEGG: bpb:bpr_I1784 6.6e-29 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Belongs to the glycosyl hydrolase 43 family.
 
     0.786
EHH00494.1
Hypothetical protein.
 
  
  0.780
EHG98244.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHG98592.1
KEGG: pru:PRU_0082 2.9e-273 putative beta-galactosidase; K12308 beta-galactosidase.
     0.733
EHG98246.1
DnaJ domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.709
EHG98243.1
Hypothetical protein; KEGG: bpb:bpr_I1784 3.5e-20 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
 
     0.702
EHG98247.1
Hypothetical protein.
       0.690
EHH00627.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.4e-17 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
 
     0.676
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.