STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98358.1Bacterial transferase hexapeptide repeat protein; KEGG: pop:POPTR_715235 1.7e-32 carbonate dehydratase; Psort location: Cytoplasmic, score: 9.97. (194 aa)    
Predicted Functional Partners:
EHG98357.1
Creatinase; KEGG: pru:PRU_2157 2.6e-178 M24B subfamily peptidase K01262; Psort location: Cytoplasmic, score: 8.96.
  
    0.792
EHG98359.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.714
EHG99779.1
GAF domain protein; KEGG: hau:Haur_1217 0.00015 multi-sensor signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96.
      0.669
EHG98356.1
Lactate/malate dehydrogenase, NAD binding domain protein; KEGG: bvu:BVU_0462 8.9e-121 malate dehydrogenase; K00024 malate dehydrogenase; Belongs to the LDH/MDH superfamily.
 
     0.615
EHG98360.1
Hypothetical protein.
       0.538
EHG99730.1
Thioredoxin; KEGG: mct:MCR_1740 1.4e-19 trx; thioredoxin K03671.
    
   0.481
EHG99481.1
Thioredoxin; KEGG: cch:Cag_1150 5.7e-23 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
    
   0.481
EHG98361.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.426
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.