STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98128.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
EHG98136.1
Hypothetical protein.
  
   0.823
EHG98137.1
Hypothetical protein.
  
   0.819
EHH01634.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
 0.811
EHH01234.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
 
 0.794
EHH00281.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
 
 0.794
EHH00585.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
 
 0.794
EHH01095.1
Hypothetical protein.
  
   0.776
EHH01094.1
Hypothetical protein.
  
   0.769
EHH00728.1
KEGG: chu:CHU_2979 0.0036 TPR repeat-containing protein K06026.
  
 
   0.748
EHG98211.1
Hypothetical protein; KEGG: cbk:CLL_A2853 0.0037 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.740
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.