STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98125.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (66 aa)    
Predicted Functional Partners:
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
    
 0.882
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.861
EHH00015.1
KEGG: sub:SUB0808 1.8e-186 pyridine nucleotide-disulphide oxidoreductase family protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the sulfur carrier protein TusA family.
    
 0.843
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.839
EHG98213.1
Hypothetical protein; KEGG: fps:FP2468 5.9e-09 paaE; phenylacetic acid degradation NADH oxidoreductase PaaE K02613.
   
 
 0.769
EHG99585.1
Hypothetical protein; KEGG: ehi:EHI_137900 0.00051 64.t00037; DNA-directed RNA polymerase I subunit 13; K03000 DNA-directed RNA polymerase I subunit A12; Psort location: CytoplasmicMembrane, score: 9.46.
    
   0.760
EHH00025.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C2483 4.0e-16 napG; quinol dehydrogenase periplasmic component K02573; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.731
EHH01168.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bvu:BVU_0979 5.4e-288 2-oxoglutarate synthase subunit KorA; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
    
 0.675
EHH01997.1
Hypothetical protein.
   
  0.625
EHH01899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
  0.625
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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