STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98094.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
EHG98095.1
Hypothetical protein.
       0.773
EHG98724.1
KEGG: pru:PRU_0173 4.6e-188 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.768
EHG98213.1
Hypothetical protein; KEGG: fps:FP2468 5.9e-09 paaE; phenylacetic acid degradation NADH oxidoreductase PaaE K02613.
  
 
 0.706
EHH01727.1
Oxidoreductase, NAD-binding domain protein; KEGG: swo:Swol_0706 6.2e-26 putative oxidoreductase; K13020 UDP-D-GlcNAcA oxidase.
  
 
 0.630
EHH00867.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
  
 
 0.630
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.562
EHG98096.1
Hypothetical protein; KEGG: bav:BAV0096 4.3e-13 bplC, wlbC; lipopolysaccharide biosynthesis protein; K13017 UDP-3-keto-D-GlcNAcA aminotransferase.
       0.539
EHG98723.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.534
EHG99424.1
Arabinose 5-phosphate isomerase; KEGG: pru:PRU_1627 6.3e-120 sugar isomerase, KpsF/GutQ family; K06041 arabinose-5-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  0.516
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.466
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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