STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG54991.1Hypothetical protein; KEGG: sli:Slin_1484 5.4e-224 alpha-L-fucosidase. (809 aa)    
Predicted Functional Partners:
EGG55604.1
Carbohydrate binding domain protein; KEGG: cai:Caci_4947 1.6e-114 alpha-L-fucosidase.
  
 
  0.855
EGG52521.1
F5/8 type C domain protein; KEGG: aau:AAur_0604 1.6e-43 hypothetical protein; K01206 alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.835
EGG52701.1
FG-GAP repeat protein; KEGG: isc:IscW_ISCW004511 1.9e-05 secreted mucin MUC17, putative.
  
 0.807
EGG55603.1
Alpha-L-fucosidase; KEGG: bth:BT_3665 1.3e-174 alpha-L-fucosidase precursor; K01206 alpha-L-fucosidase.
  
 
  0.740
EGG52824.1
Alpha-L-fucosidase; KEGG: bth:BT_3665 5.9e-147 alpha-L-fucosidase precursor; K01206 alpha-L-fucosidase.
  
 
  0.735
EGG54992.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: hor:Hore_20490 7.3e-66 beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
       0.675
EGG55574.1
F5/8 type C domain protein; KEGG: cpi:Cpin_6474 6.8e-162 coagulation factor 5/8 type domain protein; K01206 alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.660
EGG54993.1
Hypothetical protein.
       0.656
EGG54989.1
Hypothetical protein; KEGG: chu:CHU_1239 7.4e-70 bifunctional acetylxylan esterase/xylanase, CBM4 module, glycoside hydrolase family 10 protein and carbohydrate esterase family 6 protein K05972; Psort location: Cytoplasmic, score: 8.96.
     0.655
EGG54990.1
Phospholipase/carboxylesterase; KEGG: chu:CHU_2040 6.5e-68 esterase-like protein K01238; Psort location: Extracellular, score: 9.71.
 
     0.629
Your Current Organism:
Paraprevotella xylaniphila
NCBI taxonomy Id: 762982
Other names: P. xylaniphila YIT 11841, Paraprevotella xylaniphila YIT 11841, Paraprevotella xylaniphila str. YIT 11841, Paraprevotella xylaniphila strain YIT 11841
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