STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG53253.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (153 aa)    
Predicted Functional Partners:
EGG58166.1
BNR/Asp-box repeat protein; KEGG: chu:CHU_0841 6.8e-09 hypothetical protein K01238.
  
     0.749
EGG52701.1
FG-GAP repeat protein; KEGG: isc:IscW_ISCW004511 1.9e-05 secreted mucin MUC17, putative.
  
     0.743
EGG55318.1
Carbohydrate binding domain protein; KEGG: mmw:Mmwyl1_1672 3.5e-16 beta strand repeat-containing protein.
  
     0.741
EGG55868.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.736
EGG54908.1
FG-GAP repeat protein; KEGG: npu:Npun_F4869 0.0060 putative outer membrane adhesin like proteiin.
  
     0.732
EGG50276.1
KEGG: ppu:PP_4210 0.00022 efflux ABC transporter ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.730
EGG56966.1
FG-GAP repeat protein; KEGG: rba:RB105 0.00018 cysteine proteinase K01376.
  
     0.729
EGG53252.1
Conserved domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.727
EGG54850.1
FG-GAP repeat protein; KEGG: rba:RB105 0.00089 cysteine proteinase K01376.
  
     0.721
EGG51988.1
Polymorphic outer membrane protein, repeat-containing domain protein; Chlamydial; KEGG: chu:CHU_3450 4.9e-16 hypothetical protein K01238.
  
     0.721
Your Current Organism:
Paraprevotella xylaniphila
NCBI taxonomy Id: 762982
Other names: P. xylaniphila YIT 11841, Paraprevotella xylaniphila YIT 11841, Paraprevotella xylaniphila str. YIT 11841, Paraprevotella xylaniphila strain YIT 11841
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