STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFY06746.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.781
EFY06747.1
YcaO-like family; Psort location: Cytoplasmic, score: 8.96.
       0.515
lolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
       0.515
Your Current Organism:
Succinatimonas hippei
NCBI taxonomy Id: 762983
Other names: Anaerobiospirillum sp. YIT 12066, S. hippei YIT 12066, Succinatimonas hippei DSM 22608, Succinatimonas hippei JCM 16073, Succinatimonas hippei YIT 12066, Succinatimonas hippei str. YIT 12066, Succinatimonas hippei strain YIT 12066
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.