STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFY06217.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (115 aa)    
Predicted Functional Partners:
EFY06222.1
NlpB/DapX lipoprotein; Psort location: OuterMembrane, score: 9.92.
 
     0.818
EFY07909.1
Universal stress family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.759
EFY07683.1
Universal stress family protein; Psort location: Cytoplasmic, score: 9.97.
  
     0.755
EFY06972.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.755
EFY06551.1
Hypothetical protein.
  
     0.752
EFY06918.1
Universal stress family protein; Psort location: Cytoplasmic, score: 9.97.
  
     0.747
EFY07146.1
Tetratricopeptide repeat protein; KEGG: shn:Shewana3_1036 2.6e-43 lipoprotein NlpI K05803; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.714
EFY06470.1
ProQ activator of osmoprotectant transporter ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.714
dsbB
Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
  
     0.701
ttg2D
Toluene tolerance protein Ttg2D.
  
     0.698
Your Current Organism:
Succinatimonas hippei
NCBI taxonomy Id: 762983
Other names: Anaerobiospirillum sp. YIT 12066, S. hippei YIT 12066, Succinatimonas hippei DSM 22608, Succinatimonas hippei JCM 16073, Succinatimonas hippei YIT 12066, Succinatimonas hippei str. YIT 12066, Succinatimonas hippei strain YIT 12066
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.