STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF58331.1KEGG: bth:BT_3820 4.2e-153 putative DNA polymerase III, delta subunit; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97. (376 aa)    
Predicted Functional Partners:
EGF59887.1
DNA polymerase III, delta subunit; KEGG: bfs:BF2480 8.7e-162 hypothetical protein; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.990
EGF58881.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.988
EGF58152.1
KEGG: bfr:BF0712 0. DNA polymerase III alpha subunit; K02337 DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.97.
 
 0.986
EGF58882.1
Exonuclease; KEGG: bfs:BF2856 2.4e-127 putative DNA polymerase III epsilon chain; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
  
 0.967
EGF52619.1
Exonuclease; KEGG: bvu:BVU_3037 1.3e-64 putative exonuclease/DNA polymerase III epsilon C; K02342 DNA polymerase III subunit epsilon.
   
 0.956
EGF58329.1
Gliding motility-associated lipoprotein GldH; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.913
EGF58330.1
PSP1 protein; KEGG: gka:GK0026 2.5e-38 signal peptidase II; Psort location: Cytoplasmic, score: 8.96.
 
   0.894
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 
0.893
EGF52649.1
Hypothetical protein; KEGG: cpe:CPE1401 7.8e-19 DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon.
   
 0.821
EGF57991.1
KEGG: apb:SAR116_0174 9.0e-09 transcriptional regulator, MerR family; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.762
Your Current Organism:
Bacteroides fluxus
NCBI taxonomy Id: 763034
Other names: B. fluxus YIT 12057, Bacteroides fluxus DSM 22534, Bacteroides fluxus JCM 16101, Bacteroides fluxus YIT 12057, Bacteroides fluxus str. YIT 12057, Bacteroides fluxus strain YIT 12057, Bacteroides sp. YIT 12057
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.