STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF57347.1Membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (320 aa)    
Predicted Functional Partners:
EGF57350.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.970
EGF57349.1
Hypothetical protein.
 
     0.958
EGF57346.1
RDD family protein; KEGG: rba:RB7928 8.6e-05 pknB; serine/threonine protein kinase K00924; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.943
EGF57353.1
Hypothetical protein; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.879
EGF57348.1
Hypothetical protein; KEGG: bce:BC5225 0.0048 cytochrome d ubiquinol oxidase subunit II K00426; Psort location: CytoplasmicMembrane, score: 10.00.
       0.853
EGF57351.1
ATPase family protein; KEGG: bth:BT_2212 3.3e-146 magnesium chelatase, subunit I, putative ATPase; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
    0.851
EGF58980.1
Alpha-2-macroglobulin family protein.
  
    0.671
EGF59319.1
Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.616
EGF58981.1
KEGG: bth:BT_0162 0. penicillin-binding protein 1C (PBP-1c); K05367 penicillin-binding protein 1C; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.612
Your Current Organism:
Bacteroides fluxus
NCBI taxonomy Id: 763034
Other names: B. fluxus YIT 12057, Bacteroides fluxus DSM 22534, Bacteroides fluxus JCM 16101, Bacteroides fluxus YIT 12057, Bacteroides fluxus str. YIT 12057, Bacteroides fluxus strain YIT 12057, Bacteroides sp. YIT 12057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.