STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF56325.1Leucine Rich repeat-containing domain protein; KEGG: edi:EDI_083850 1.6e-08 polygalacturonase inhibitor 1 precursor. (911 aa)    
Predicted Functional Partners:
EGF56327.1
Conserved domain protein.
     0.820
EGF56326.1
Hypothetical protein.
       0.531
EGF59561.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rpf:Rpic12D_0829 7.9e-16 Hpt sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.496
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
       0.456
EGF50349.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 9.0e-09 blaI; beta-lactamase (penicillinase) repressor K07737.
 
  
  0.430
lspA
Signal peptidase II family protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.416
EGF51711.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 1.3e-09 blaI; beta-lactamase (penicillinase) repressor K07737.
 
  
  0.406
EGF57580.1
Putative pantothenate kinase.
  
     0.404
Your Current Organism:
Bacteroides fluxus
NCBI taxonomy Id: 763034
Other names: B. fluxus YIT 12057, Bacteroides fluxus DSM 22534, Bacteroides fluxus JCM 16101, Bacteroides fluxus YIT 12057, Bacteroides fluxus str. YIT 12057, Bacteroides fluxus strain YIT 12057, Bacteroides sp. YIT 12057
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