STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF51656.1Hydrogenase maturation GTPase HydF; KEGG: bao:BAMF_3918 5.4e-11 thdF; tRNA modification GTPase TrmE; Psort location: Cytoplasmic, score: 9.12. (400 aa)    
Predicted Functional Partners:
EGF51654.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: bvu:BVU_0348 2.2e-140 biotin synthase K01012; Psort location: Cytoplasmic, score: 8.96.
   
 0.995
EGF51655.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.5e-111 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
   
 0.985
EGF51653.1
4Fe-4S binding domain protein; KEGG: brm:Bmur_2631 9.9e-106 ferredoxin hydrogenase.
 
   
 0.894
EGF55486.1
NAD-dependent glycerol-3-phosphate dehydrogenase [NAD(P)+ ] protein; KEGG: bth:BT_2123 5.2e-164 glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+); Psort location: Cytoplasmic, score: 9.26; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.683
cmk
Cytidylate kinase; KEGG: bth:BT_2060 5.1e-102 cmk; cytidylate kinase; K00945 cytidylate kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.630
EGF56704.1
KEGG: ddd:Dda3937_00230 1.4e-92 thiH, thiA; thiamin biosynthesis ThiGH complex subunit K03150; Psort location: Cytoplasmic, score: 8.96.
   
 0.617
EGF52580.1
GTP-binding protein TypA; KEGG: bur:Bcep18194_A4648 7.1e-167 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.612
EGF56539.1
Pseudouridylate synthase; KEGG: bth:BT_3872 1.2e-114 ribosomal large subunit pseudouridine synthase B; K06178 ribosomal large subunit pseudouridine synthase B; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.609
EGF59587.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
    0.513
EGF59588.1
Hypothetical protein; KEGG: bsu:BSU25210 1.0e-06 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96.
   
    0.513
Your Current Organism:
Bacteroides fluxus
NCBI taxonomy Id: 763034
Other names: B. fluxus YIT 12057, Bacteroides fluxus DSM 22534, Bacteroides fluxus JCM 16101, Bacteroides fluxus YIT 12057, Bacteroides fluxus str. YIT 12057, Bacteroides fluxus strain YIT 12057, Bacteroides sp. YIT 12057
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