Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCHK_3209Hypothetical protein. (104 aa)    
Predicted Functional Partners:
virR
Uncharacterized UPF0066 family protein.
       0.855
metF-2
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.695
arsR-2
Bacterial regulatory, arsR family protein.
       0.695
omp19
Bacterial outer membrane lipoomp19 family protein.
  
     0.652
MCHK_1788
Hypothetical protein.
  
     0.632
MCHK_0191
Hypothetical protein.
  
     0.593
omp2b-2
Porin omp2b; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.590
MCHK_4538
Hypothetical protein.
  
     0.589
MCHK_1317
Hypothetical protein.
  
     0.576
MCHK_5216
Opacity porin family protein.
  
     0.573
Your Current Organism:
Mesorhizobium huakuii
NCBI taxonomy Id: 763057
Other names: M. huakuii 7653R, Mesorhizobium huakuii 7653R, Mesorhizobium huakuii str. 7653R, Mesorhizobium huakuii strain 7653R
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