STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCHK_3835Flavin reductase like domain protein. (182 aa)    
Predicted Functional Partners:
MCHK_3837
Hypothetical protein.
 
  
 0.731
MCHK_3836
acyl-CoA dehydrogenase, C-terminal domain protein.
 
  
 0.695
MCHK_3839
Alpha/beta hydrolase fold family protein.
  
  
 0.553
gloA3
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
  
 
 0.532
MCHK_3838
Hypothetical protein.
       0.519
nrd
Nitrilotriacetate monooxygenase component A.
 
 
 0.488
ntaA-2
Nitrilotriacetate monooxygenase component A.
 
 
 0.466
ntaA
Nitrilotriacetate monooxygenase component A.
 
 
 0.460
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.432
MCHK_5409
Hypothetical protein.
 
 
 0.414
Your Current Organism:
Mesorhizobium huakuii
NCBI taxonomy Id: 763057
Other names: M. huakuii 7653R, Mesorhizobium huakuii 7653R, Mesorhizobium huakuii str. 7653R, Mesorhizobium huakuii strain 7653R
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