STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCHK_5071HWE histidine kinase family protein. (344 aa)    
Predicted Functional Partners:
MCHK_5069
Response regulator.
 
   
 0.852
MCHK_5066
Response regulator.
 
   
 0.802
MCHK_5058
PRC-barrel domain protein.
 
     0.677
rpoE-2
RNA polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.673
MCHK_0385
Sensory box protein.
  
     0.647
lovR
Response regulator.
 
   
 0.611
MCHK_5070
Hypothetical protein.
 
     0.581
MCHK_5570
Hypothetical protein.
  
     0.580
atsE-3
Required for attachment to host cells family protein.
  
     0.559
MCHK_4645
Hypothetical protein.
  
     0.519
Your Current Organism:
Mesorhizobium huakuii
NCBI taxonomy Id: 763057
Other names: M. huakuii 7653R, Mesorhizobium huakuii 7653R, Mesorhizobium huakuii str. 7653R, Mesorhizobium huakuii strain 7653R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.