Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCHK_4854 | MCHK_5409 | MCHK_4854 | MCHK_5409 | Luciferase-like monooxygenase family protein. | Hypothetical protein. | 0.975 |
MCHK_4854 | MCHK_5531 | MCHK_4854 | MCHK_5531 | Luciferase-like monooxygenase family protein. | NADPH-dependent FMN reductase family protein. | 0.413 |
MCHK_4854 | chrR6 | MCHK_4854 | MCHK_5825 | Luciferase-like monooxygenase family protein. | Flavodoxin-like fold family protein. | 0.413 |
MCHK_4854 | ssuD1 | MCHK_4854 | MCHK_6264 | Luciferase-like monooxygenase family protein. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.928 |
MCHK_5409 | MCHK_4854 | MCHK_5409 | MCHK_4854 | Hypothetical protein. | Luciferase-like monooxygenase family protein. | 0.975 |
MCHK_5409 | MCHK_5531 | MCHK_5409 | MCHK_5531 | Hypothetical protein. | NADPH-dependent FMN reductase family protein. | 0.413 |
MCHK_5409 | chrR6 | MCHK_5409 | MCHK_5825 | Hypothetical protein. | Flavodoxin-like fold family protein. | 0.413 |
MCHK_5409 | ntaA | MCHK_5409 | MCHK_0819 | Hypothetical protein. | Nitrilotriacetate monooxygenase component A. | 0.765 |
MCHK_5409 | ssuD1 | MCHK_5409 | MCHK_6264 | Hypothetical protein. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.929 |
MCHK_5531 | MCHK_4854 | MCHK_5531 | MCHK_4854 | NADPH-dependent FMN reductase family protein. | Luciferase-like monooxygenase family protein. | 0.413 |
MCHK_5531 | MCHK_5409 | MCHK_5531 | MCHK_5409 | NADPH-dependent FMN reductase family protein. | Hypothetical protein. | 0.413 |
MCHK_5531 | chrR6 | MCHK_5531 | MCHK_5825 | NADPH-dependent FMN reductase family protein. | Flavodoxin-like fold family protein. | 0.733 |
MCHK_5531 | ntaA | MCHK_5531 | MCHK_0819 | NADPH-dependent FMN reductase family protein. | Nitrilotriacetate monooxygenase component A. | 0.413 |
MCHK_5531 | ribF | MCHK_5531 | MCHK_1568 | NADPH-dependent FMN reductase family protein. | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.477 |
MCHK_5531 | ssuD1 | MCHK_5531 | MCHK_6264 | NADPH-dependent FMN reductase family protein. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.557 |
MCHK_5823 | chrR6 | MCHK_5823 | MCHK_5825 | Hypothetical protein. | Flavodoxin-like fold family protein. | 0.752 |
MCHK_5823 | pmtA-2 | MCHK_5823 | MCHK_5826 | Hypothetical protein. | Putative phospholipid N-methyltransferase. | 0.551 |
MCHK_5823 | pyrF | MCHK_5823 | MCHK_5824 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.760 |
chrR6 | MCHK_4854 | MCHK_5825 | MCHK_4854 | Flavodoxin-like fold family protein. | Luciferase-like monooxygenase family protein. | 0.413 |
chrR6 | MCHK_5409 | MCHK_5825 | MCHK_5409 | Flavodoxin-like fold family protein. | Hypothetical protein. | 0.413 |
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