STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3NQY3Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
A0A1E3NP26
Uncharacterized protein.
   
 0.996
A0A1E3NQW6
Uncharacterized protein.
   
 
 0.989
A0A1E3NTM5
WW domain-containing protein.
   
 
 0.978
A0A1E3NHF8
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 
 0.977
A0A1E3NF45
Uncharacterized protein.
    
 0.976
A0A1E3NE17
Nuclear cap-binding protein subunit 2.
    
 
 0.973
A0A1E3NT46
Matrin-type domain-containing protein.
    
 0.966
A0A1E3NL15
Uncharacterized protein.
    
 0.954
A0A1E3NFT0
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.942
A0A1E3NSD0
Uncharacterized protein.
   
 
 0.933
Your Current Organism:
Pichia membranifaciens
NCBI taxonomy Id: 763406
Other names: P. membranifaciens NRRL Y-2026, Pichia membranifaciens NRRL Y-2026
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