STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162ND63Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A0A167LV55
Uncharacterized protein.
    
 0.777
A0A167L655
3'-5' exonuclease domain-containing protein.
    
 0.751
A0A167K9C3
Erf4 domain-containing protein.
    
 0.745
A0A162T215
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
    
  0.617
A0A162XPY2
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.607
A0A167NM89
DNA polymerase.
    
  0.602
A0A167JD07
Uncharacterized protein.
     
 0.586
A0A162N615
AAA domain-containing protein.
     
 0.580
A0A162ZWE1
AAA domain-containing protein.
     
 0.580
A0A167KG19
AAA domain-containing protein.
     
 0.580
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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