STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162NGB6HIT-type domain-containing protein. (450 aa)    
Predicted Functional Partners:
A0A167L0W4
Rtt106 domain-containing protein.
    
   0.917
A0A162TB59
Nop domain-containing protein.
   
 
 0.786
A0A163AJ29
Nop domain-containing protein.
   
 
 0.786
A0A162NJG5
RNA helicase.
   
  
 0.661
A0A162PSZ5
Uncharacterized protein.
   
  
 0.660
A0A163EJR6
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.657
A0A162TBV6
Abhydrolase_2 domain-containing protein.
    
   0.645
A0A162WWW2
Abhydrolase_2 domain-containing protein.
    
   0.645
A0A167RET9
Abhydrolase_2 domain-containing protein.
    
   0.645
A0A167REW0
Abhydrolase_2 domain-containing protein.
    
   0.645
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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