A0A162PRR7 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A162PRR7

PPM-type phosphatase domain-containing protein. (270 aa)

Predicted Functional Partners:

A0A162Y9D7

0.838

A0A167NPW8

0.820

A0A162TLV2

0.816

A0A162U5H0

0.816

A0A167JAP0

0.816

A0A167LG10

0.816

A0A167LNA9

0.816

A0A167NK44

0.816

A0A162UNK1

0.765

A0A163DPS8

0.765

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162PRR7	A0A162TLV2	PPM-type phosphatase domain-containing protein.	Mitogen-activated protein kinase.	0.816
A0A162PRR7	A0A162U5H0	PPM-type phosphatase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.816
A0A162PRR7	A0A162UNK1	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.765
A0A162PRR7	A0A162Y9D7	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.838
A0A162PRR7	A0A163DPS8	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.765
A0A162PRR7	A0A167JAP0	PPM-type phosphatase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.816
A0A162PRR7	A0A167LG10	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.816
A0A162PRR7	A0A167LNA9	PPM-type phosphatase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.816
A0A162PRR7	A0A167NK44	PPM-type phosphatase domain-containing protein.	Mitogen-activated protein kinase.	0.816
A0A162PRR7	A0A167NPW8	PPM-type phosphatase domain-containing protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.820
A0A162TLV2	A0A162PRR7	Mitogen-activated protein kinase.	PPM-type phosphatase domain-containing protein.	0.816
A0A162TLV2	A0A162Y9D7	Mitogen-activated protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.884
A0A162U5H0	A0A162PRR7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	PPM-type phosphatase domain-containing protein.	0.816
A0A162U5H0	A0A162Y9D7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.891
A0A162UNK1	A0A162PRR7	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.765
A0A162Y9D7	A0A162PRR7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.838
A0A162Y9D7	A0A162TLV2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.884
A0A162Y9D7	A0A162U5H0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.891
A0A162Y9D7	A0A167JAP0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.884
A0A162Y9D7	A0A167LG10	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.884