STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162Q6R5Ubiquitin carboxyl-terminal hydrolase. (739 aa)    
Predicted Functional Partners:
A0A167KWM3
Uncharacterized protein.
    
 0.854
A0A167R6J7
Uncharacterized protein.
    
 0.854
A0A162NEJ9
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.849
A0A162UNK1
Uncharacterized protein.
    
 0.809
A0A162NJQ6
Uncharacterized protein.
    
 0.799
A0A162TQY2
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.786
A0A167QT73
Ubiquitin-like domain-containing protein.
    
 0.781
A0A162V544
RRN7-type domain-containing protein.
    
  0.779
A0A167PIR9
Ubiquitin-like domain-containing protein.
    
  0.779
A0A167KUM1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.778
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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