A0A162THP5 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A162THP5

EH domain-containing protein. (469 aa)

Predicted Functional Partners:

A0A162WXU4

0.957

A0A167Q2J2

0.957

A0A167JTY9

0.809

A0A167LPK7

0.808

Plo1

0.806

A0A167MLT6

0.797

A0A162U927

0.794

A0A167R130

0.794

A0A167KX02

0.785

A0A167M294

0.785

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162THP5	A0A162U927	A0A162THP5	A0A162U927	EH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.794
A0A162THP5	A0A162WXU4	A0A162THP5	A0A162WXU4	EH domain-containing protein.	DH domain-containing protein.	0.957
A0A162THP5	A0A167JTY9	A0A162THP5	A0A167JTY9	EH domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.809
A0A162THP5	A0A167KX02	A0A162THP5	A0A167KX02	EH domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.785
A0A162THP5	A0A167LPK7	A0A162THP5	A0A167LPK7	EH domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.808
A0A162THP5	A0A167M294	A0A162THP5	A0A167M294	EH domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.785
A0A162THP5	A0A167MLT6	A0A162THP5	A0A167MLT6	EH domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.797
A0A162THP5	A0A167Q2J2	A0A162THP5	A0A167Q2J2	EH domain-containing protein.	DH domain-containing protein.	0.957
A0A162THP5	A0A167R130	A0A162THP5	A0A167R130	EH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.794
A0A162THP5	Plo1	A0A162THP5	A0A162TVH4	EH domain-containing protein.	Serine/threonine protein kinase.	0.806
A0A162U927	A0A162THP5	A0A162U927	A0A162THP5	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	EH domain-containing protein.	0.794
A0A162U927	A0A162WXU4	A0A162U927	A0A162WXU4	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	DH domain-containing protein.	0.994
A0A162U927	A0A167JTY9	A0A162U927	A0A167JTY9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.989
A0A162U927	A0A167KX02	A0A162U927	A0A167KX02	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.961
A0A162U927	A0A167LPK7	A0A162U927	A0A167LPK7	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.897
A0A162U927	A0A167M294	A0A162U927	A0A167M294	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.961
A0A162U927	A0A167MLT6	A0A162U927	A0A167MLT6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.922
A0A162U927	A0A167Q2J2	A0A162U927	A0A167Q2J2	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	DH domain-containing protein.	0.994
A0A162WXU4	A0A162THP5	A0A162WXU4	A0A162THP5	DH domain-containing protein.	EH domain-containing protein.	0.957
A0A162WXU4	A0A162U927	A0A162WXU4	A0A162U927	DH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.994