STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162TKK7Homeodomain-like DNA binding domain-containing transcription factor. (1052 aa)    
Predicted Functional Partners:
A0A163BBX9
DDT transcription factor.
    
 0.977
A0A162U7N1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.963
A0A167PQ23
PHD domain-containing protein.
    
 0.962
A0A162NEX2
Histone H2A; Belongs to the histone H2A family.
   
 0.944
A0A162U2X0
Histone H2A; Belongs to the histone H2A family.
   
 0.944
A0A167PXR7
Uncharacterized protein.
    
 0.924
A0A167L9A7
Uncharacterized protein.
   
 0.918
A0A162N3B5
WD_REPEATS_REGION domain-containing protein.
   
 0.914
A0A162N5W0
WD_REPEATS_REGION domain-containing protein.
   
 0.914
A0A162ZW26
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.905
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.