STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
carCGeranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (299 aa)    
Predicted Functional Partners:
A0A167NPH3
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.904
A0A167NIZ1
Farnesyl diphosphate synthase.
  
 0.903
A0A162TW76
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.890
A0A167MRZ0
Tryptophan synthase.
    
 0.887
dmappS
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.848
A0A167PQ51
Uncharacterized protein; Belongs to the cytochrome b5 family.
  
 
 0.839
CarRA
Phytoene Synthase/Lycopene cyclase.
  
 0.838
A0A162TCT0
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.828
A0A162PV35
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.820
A0A167KHD2
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.816
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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