STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162U1L4Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
A0A162THZ1
Small nuclear ribonucleoprotein Sm D2.
    
 0.973
A0A162XQI6
Small nuclear ribonucleoprotein G.
    
  0.970
A0A162PSU0
Sm domain-containing protein.
    
  0.960
A0A162TW64
Sm domain-containing protein.
    
  0.960
A0A163CS66
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.960
A0A163DZK5
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.960
A0A162URN8
F-box domain-containing protein.
    
  0.952
A0A162V3A6
F-box domain-containing protein.
    
  0.952
A0A162NIJ6
Sm domain-containing protein.
    
 0.825
A0A163B5P5
Sm domain-containing protein.
    
 0.825
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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