STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162U3C7Rab-GAP TBC domain-containing protein. (1029 aa)    
Predicted Functional Partners:
A0A167N6V5
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.956
A0A163DV23
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.793
A0A163DV84
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.793
A0A167MGH3
Uncharacterized protein.
   
 
 0.779
A0A167QFK5
Uncharacterized protein.
   
 
 0.779
A0A162ULI7
Uncharacterized protein.
   
 
 0.600
A0A167NJP4
Uncharacterized protein.
   
 
 0.600
A0A167Q6E0
Uncharacterized protein.
   
 
 0.600
A0A162XB69
Tubby transcription factor, C-terminal; Belongs to the TUB family.
    
 
 0.590
A0A163E8G3
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.554
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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