STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162U8V7Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (585 aa)    
Predicted Functional Partners:
A0A163DWE5
Uncharacterized protein.
  
 0.870
A0A162TET3
BPL/LPL catalytic domain-containing protein.
  
  
 0.589
A0A162UQI2
tRNA-binding domain-containing protein.
  
 
 0.574
A0A167R3R6
Tyrosine--tRNA ligase.
  
 
 0.574
A0A167MHH6
SAND-like domain-containing transcription factor.
    
 
 0.565
A0A162PZK1
RNB domain-containing protein.
  
 0.559
A0A162UAK5
Uncharacterized protein; Belongs to the RNR ribonuclease family.
  
 0.559
A0A162V2U8
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 0.559
A0A163BFW3
RNB domain-containing protein.
  
 0.559
A0A167LNU3
RNB domain-containing protein.
  
 0.559
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.